The University of Sheffield
Browse
DATASET
XCMS.diffreport..Evolved_Mg_plasmid.vs.Evolved_Mg_AB_plasmid.tsv (4.2 MB)
DATASET
XCMS.diffreport..Evolved_Mg_free.vs.Evolved_Mg_plasmid.tsv (4.39 MB)
DATASET
XCMS.diffreport..Evolved_Mg_free.vs.Evolved_Mg_AB_plasmid.tsv (4.33 MB)
DATASET
XCMS.diffreport..Evolved_EL_plasmid.vs.Evolved_EL_free.tsv (3.9 MB)
DATASET
XCMS.diffreport..Evolved_EL_plasmid.vs.Evolved_EL_AB_plasmid.tsv (4 MB)
DATASET
XCMS.diffreport..Evolved_EL_AB_plasmid.vs.Evolved_EL_free.tsv (3.83 MB)
DATASET
XCMS.diffreport..Evolved_22_plasmid.vs.Evolved_22_free.tsv (3.86 MB)
DATASET
XCMS.diffreport..Evolved_22_AB_plasmid.vs.Evolved_22_plasmid.tsv (4.92 MB)
DATASET
XCMS.diffreport..Evolved_22_AB_plasmid.vs.Evolved_22_free.tsv (4.74 MB)
DATASET
TechRAv_Peaktable_Evolved_MG_Free_AntiB.csv (900.59 kB)
DATASET
TechRAv_Peaktable_Evolved_MG_AntiBio_Plas.csv (882.07 kB)
DATASET
TechRAv_Peaktable_Evolved_EL_AntiBio_Plas.csv (815.74 kB)
DATASET
TechRAv_Peaktable_Evolved_EL_AntiBio_Free.csv (778.29 kB)
DATASET
TechRAv_Peaktable_Evolved_22_AntiBio_Plas.csv (1006.46 kB)
DATASET
TechRAv_Peaktable_Evolved_22_AntiBio_Free.csv (974.86 kB)
DATASET
Techav_Peaktable_Multigroup_AllEvolved_MetaboAnready.csv (6.73 MB)
DATASET
TechAv_Peaktable_Evolved_Multigroup_Mg.csv (1.43 MB)
DATASET
TechAv_Peaktable_Evolved_Multigroup_El.csv (1.28 MB)
DATASET
TechAv_Peaktable_Evolved_Multigroup_22.csv (1.63 MB)
DATASET
TechAv_Peaktable_Evolved_MG_Plasmid_Free.csv (912.32 kB)
1/0
36 files

Metabolomic Data of Evolved Strains

Download all (123.9 MB)
dataset
posted on 2024-08-15, 23:54 authored by Kathryn Billane

Following Chapter 4 of my thesis, 3 E.coli strains (MG1655, F022 and ELU39) were analysed using untargeted metabolomics after ~700 generations of evolution in 1 of three conditions: Plasmid free, plasmid carrying and plasmid carrying with antibiotic selection.

Files are metabolomic peak table data after processing in xcms.

XCMS diffreport files are the output from xcms peak picking processing.

Peak tables are the formatted versions and techav peak tables are further condensed by averaging technical replicates

Raw data is too large to be uploaded, please contact the University of Sheffield Mass Spectrometry Department (massspectrometry@sheffield.ac.uk) where data is stored under Mass Spec -> Metabolomics -> Kathryn -> Evolved


History

Ethics

  • There is no personal data or any that requires ethical approval

Policy

  • The data complies with the institution and funders' policies on access and sharing

Sharing and access restrictions

  • The uploaded data can be shared openly

Data description

  • The file formats are open or commonly used

Methodology, headings and units

  • Headings and units are explained in the files

Responsibility

  • The depositor is responsible for the content and sharing of the attached files

Usage metrics

    Department of Animal and Plant Sciences

    Categories

    Keywords

    evolution experimentmetabolomicE.coliAntibiotic

    Licence

    CC BY 4.0

    Exports

    RefWorks
    BibTeX
    Ref. manager
    Endnote
    DataCite
    NLM
    DC