Supplementary data for 'Nucleosome-mediated conformational switches in micro-eccDNAs'.
dataset
posted on 2025-08-05, 08:08 authored by Sarah HarrisSarah Harris, Victor Manuel Velasco BerrellezaVictor Manuel Velasco Berrelleza, William Sandel, Thana Sutthibutpong, Victoria Parikh, Euan Ashley, Andrew Fire, Stephen Levene, Thomas C Bishop, Massa Shoura<p dir="ltr">The desolvated molecular dynamics (MD) trajectories containing imaged counterions are available to download in AMBER topology (parm7) and trajectory (netcdf) formats. The fully solvated AMBER format topology and coordinate files of the starting structures used in the MD simulations for representative di- and mononucleosome and naked eccDNA structures are also available.</p>
Funding
The UK High-End Computing Consortium for Biomolecular Simulation
Engineering and Physical Sciences Research Council
Find out more...HECBioSim: The UK High End Computing Consortium for Biomolecular Simulation.
Engineering and Physical Sciences Research Council
Find out more...CCPBioSim: Biomolecular Simulation at the Life Science Interface
Engineering and Physical Sciences Research Council
Find out more...EPSRC-SFI: Supercoiling-driven gene control in synthetic DNA circuits
Engineering and Physical Sciences Research Council
Find out more...History
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