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Stalefish

software
posted on 2022-09-23, 13:34 authored by Sebastian James, Stuart P. Wilson, Mackenzie Englund

Stalefish is a software tool for the analysis of 2D brain slice images, allowing  the neurobiologist to reconstruct three dimensional gene expression  surfaces from ISH (or other histological) slices. The 3D surfaces can then be digitally  unwrapped to make 2D expression maps.


Stalefish stands for: Spatial Analysis of ISH Brain Slice Data


Funding

James S. McDonnell Foundation, grant 220020516

History

Ethics

  • There is no personal data or any that requires ethical approval

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  • The data complies with the institution and funders' policies on access and sharing

Sharing and access restrictions

  • The data can be shared openly

Data description

  • The file formats are open or commonly used

Methodology, headings and units

  • Headings and units are explained in the files

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    School of Psychology

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